Mental health therapist uses ehr for behavioral health
  • Choose an EHR built for behavioral health with specialty templates and security features.
  • Prioritize telehealth integration, billing tools, and HIPAA-compliant patient portals.
  • Test vendors with demos, verify training support, and review pricing before committing.

For mental health professionals, the right electronic health record (EHR) should adapt to your specialty and not the other way around. That means selecting a system built for customization, flexibility, and the unique way you deliver care. Your investment in an EHR should reduce the time you spend on mundane tasks, like billing and documentation, and increase your availability for direct, billable hours. 

The demand for behavioral health services has never been higher. At least 1 in 5 adults in the United States lives with a mental illness, according to the National Institute of Mental Health (NIMH). That makes reliable, accessible care more essential. 

Especially since the COVID-19 pandemic, technology has played a central role in meeting that demand. Individuals in need of mental healthcare can log on to their laptop, tablet, or phone to receive professional treatment with the provisions of an EHR. 

As private practice therapist Kristin Trick, MA, LPC-S, RPT, explains: “Investing in an EHR for your practice is more important than marketing for new clients or preparing your office space.” Read on to discover which EHR features to look for, how to evaluate vendors, and the steps to take to select the system that suits your specific workflows and needs. 

Why your EHR matters for behavioral health

For behavioral health professionals, documentation is different from other specialties. Therapy notes, psychiatric evaluations, and treatment plans often contain some of the most sensitive information in healthcare. 

At the same time, providers must manage complex, long-term treatment plans, track outcomes over time, and coordinate care across multiple settings. They must also be prepared for third parties to review their documentation, as in the cases of court orders, insurance audits, and patients’ or their guardians’ requests to view their charts. 

"Investing in an EHR for your practice is more important than marketing for new clients or preparing your office space."
Kristin Trick, MA, LPC-S, RPT
Therapist in private practice
Kristin Trick, contributor to Tebra's The Intake

A generic EHR may not fully protect or organize this information, which can put both patients and providers at risk. That’s why a behavioral health-specific system matters: It safeguards confidentiality, supports accurate documentation, and makes it easier to demonstrate progress toward treatment goals.

3 steps to choosing an EHR for behavioral health

Consider taking these 3 foundational steps to find the best EHR for behavioral health.

1. Assess your practice’s needs

The right EHR depends on your workflows, team size, and growth plans. Before comparing vendors, take time to define your priorities.

Ask yourself:

  • What kinds of documentation do we use most often? (Psychiatry templates, counseling notes, and outcome measures like PHQ-9?)
  • Which workflows create the most friction? (Billing, scheduling, labs, or telehealth?)
  • What compliance and security safeguards are non-negotiable? (Role-based access, stronger encryption, and audit trails?)
  • How much onboarding and training will our team need?
  • Which pricing model aligns with our budget and growth goals?
  • What access do we want to share with our patients? (Secure messaging to providers, appointment requests and cancellations, and online payments?)

2. Prioritize essential features 

Once you’ve defined your needs, focus on key features:

  • Screening tools. Search for EHRs that feature behavioral health-specific patient screening tools, such as ones for anxiety (GAD-7), depressive (PHQ-9), posttraumatic stress (PCL-5) and bipolar (MDQ) disorders.
  • Customizable templates. Specialty templates for therapy notes, psychiatric evaluations, and treatment plans improve documentation accuracy and reduce errors. They also help providers capture DSM-5 codes and standardized assessments like PHQ-9 or GAD-7 consistently.
  • Recurring appointments. As a mental health provider, you may want to recommend regular appointments with your patients for their treatment. Look for platforms that allow you to easily schedule recurring individual or group appointments.
  • Patient portals. Meet the digital preferences of modern patients by choosing an EHR-integrated portal that offers patients secure messaging, access to their statements, and easy ways to submit payments.
  • Integrated telehealth. Virtual care works best when it’s built into the EHR, not added as a separate tool. Look for secure video visits, integrated documentation, encrypted messaging, flexible scheduling, automated reminders, and HIPAA-compliant privacy safeguards.Visit the EHR’s discussion board to learn what problems other providers have encountered with the virtual software, what the EHR team did to resolve the issues, and how quickly the team responded.
  • Billing integration. Connecting clinical documentation with financial workflows speeds up claims submission, reduces denials, and provides clearer visibility into revenue cycle health. Watch demo videos to learn how the EHR handles insurance claims and what you’ll need to prepare. 
  • Mobile and cloud access. Secure, cloud-based systems allow providers to access records anytime, anywhere, which supports coordination across teams and locations. During your EHR trial period, log in to the portal from a phone, tablet, and laptop or desktop computer to confirm which device provides the best experience for yourself and your patients.
"Meet the digital preferences of modern patients by choosing an EHR-integrated portal that offers patients secure messaging, access to their statements, and easy ways to submit payments."

3. Consider compliance and security 

For mental health professionals, the highest level of protection is required for therapy notes and psychiatric evaluations. A behavioral health EHR should make compliance easier, not harder.

Look for systems with:

  • Role-based access controls to limit who can view sensitive notes. For instance, your administrative staff should have access to calendar and billing information, but not your clinical documentation.
  • Data encryption for stored and transmitted information. Locate the EHR’s Business Associate Agreement (BAA), which is a legal document acknowledging their role in protecting your patients’ records. 
  • Audit trails that log every access or change, and provide space for you to note why a change was made. 
  • Automated reminders for compliance tasks. Some EHRs allow you to create a personal to-do list, viewable every time you log in, thus eliminating your need for sticky notes, which can easily be lost in your office. 
  • HIPAA-compliant telehealth with secure video and messaging. Verify how many participants can join the EHR’s telehealth window at the same time, especially if you intend to provide virtual group therapy or family sessions that include members from different locations.  

Evaluating vendors and support

Once you know which features and safeguards to prioritize, the next step is evaluating whether vendors can deliver on those promises. Here are questions to ask before signing a contract.

1. How is your EHR tailored for behavioral health? 

Make sure the system includes psychiatry and counseling templates, outcome measures like PHQ-9, and tools for care coordination. Inquire about the frequency of system upgrades and additional features. 

2. What integrations are available? 

Confirm that billing, scheduling, lab systems, and telehealth platforms connect seamlessly with the EHR. Understand how the EHR will handle your patients’ payments, which include credit card processing fees, and its payout schedule. 

3. How do you handle compliance and security? 

Look for HIPAA compliance, role-based access for sensitive notes, and data encryption. Review the BAA in detail and save a copy after signing it for your records.

4. What does onboarding and training look like? 

Evaluate the implementation timeline, training resources, and ongoing support options. If you run a group practice, ask how each clinician can receive training (all at once during a staff meeting, or individually within their admin hours?). 

Inquire about the average response times for all support interventions, including chat, email, and phone requests.

5. How does your pricing model work? 

Clarify whether costs are per provider, per user, or subscription-based, and ask about fees for upgrades, templates, or support. For example, you may need to pay one rate for yourself as a clinical provider in addition to a different rate for one administrative user. 

Check on whether or not there are additional costs involved for prescribing medications or facilitating group telehealth services. 

"A behavioral health-specific EHR matters because it safeguards confidentiality, supports accurate documentation, and makes it easier to demonstrate progress toward treatment goals."

The importance of demos and training

A feature list only tells part of the story. The best way to know if an EHR fits is to see it in action. Ask vendors for demos that mirror your workflows — documenting a therapy session, sending a prescription, submitting a claim, or scheduling a virtual appointment. 

Share sample scenarios in advance so you can see how the system handles documentation and reporting in real situations.

Training and onboarding are just as critical as the demo itself. Choose a vendor that offers comprehensive training which covers the clinical, billing, and patient features. They should also guide you through data migration, template setup, and workflow mapping. 

Finally, confirm what ongoing support looks like — from after-hours help to software updates — so your team has backup when challenges arise. For instance, all Tebra customers can gain 24/7 access to Tebra University (Tebra U), a comprehensive online portal that offers live training, pre-designed courses, and eLearning.

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Final checklist for selecting the best EHR for behavioral health

Use this structured checklist to help you move from evaluation to a confident selection:

  • Clarify your practice needs by identifying the workflows, compliance requirements, and growth goals most important to your team.
  • Prioritize features such as customizable templates, outcome tracking tools, integrated telehealth, billing integration, and secure cloud access.
  • Evaluate compliance and security by confirming HIPAA safeguards, role-based access, data encryption, audit trails, and secure telehealth.
  • Schedule 5–10 vendors and prepare workflow scenarios in advance to test the system realistically.
  • Confirm training and support by selecting a vendor that provides role-based training, guided onboarding, and ongoing assistance.
  • Check pricing models by clarifying whether costs are per provider, per user, or subscription-based, and asking about hidden fees.
  • Review references by requesting case studies or examples from practices similar in size and specialty to yours.

Confidentiality, complexity, and rising demand all define behavioral health. Your EHR should help you stay compliant, deliver better care, and scale efficiently as your practice grows.

Find out how Tebra's behavioral health-specific EHR supports your practice with customizable templates, outcome tracking tools, and comprehensive compliance safeguards designed for mental health professionals. Book a free, personalized demo today.

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Written by

Michelle Meier, freelance healthcare writer

Michelle Meier is a freelance writer with extensive experience writing about B2B/SaaS, digital health, and US healthcare. Her passion for writing about healthcare stems from an interest in health equity, addressing SDoHs, and improving access to care for all. She enjoys working to further the conversation about key issues impacting the healthcare landscape today. She lives in New York.

Reviewed by

Kristin Trick

Kristin Trick, MA, LPC-S, RPT is a therapist in private practice in El Paso, TX. She specializes in the treatment of post-traumatic stress and anxiety disorders, using evidence-based therapies including Play Therapy and Eye movement desensitization and reprocessing (EMDR). She has worked in the psychiatric hospital, non-profit agency, and private practice settings over the past 10 years. Kristin has conducted mental health presentations at the local, regional, and national levels. She enjoys running, cooking, and traveling.

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