Physician smiles after learning about the best medical billing software features
  • Choose software with automated claims management to reduce denials and boost cash flow.
  • Ensure HIPAA compliance, EHR integration, and real-time eligibility verification features.
  • Select scalable, cloud-based solutions with customizable reporting and patient payment tools.

Selecting medical billing software is like hiring a financial strategist. With the right medical billing software features in place, you account for every dollar, mitigate risk, and seize billing opportunities to improve your financial health. 

All of this is critical as 60% of medical group leaders report an increase in their practices’ claim denial rates. This is valuable revenue lost and, in some cases, never recouped.

Unfortunately, like strategists, not all medical billing systems are created equally. What might work for one specialty or practice size might not be effective for another. And your healthcare business goals may also eliminate some vendors right out of the gate because they simply can’t give you what you need. 

However, aligning platform capabilities with practice needs is paramount. The right medical billing software features streamline your billing process, improve your patient data accuracy, enhance your billing workflows, and drive better financial performance. 

In this guide, we’ll walk you through essential medical billing software features that benefit all medical practices. Use this as a starting point as you dig deeper into available options that fit your unique practice needs.

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Claims management

While some medical billing software vendors tout “automation,” the reality is that the medical billing solutions they offer may still require manual interventions for scrubbing, tracking, or follow-up. 

The best medical billing software features:

  • Automate claim processing and scrubbing
  • Expedite claim submission to increase cash flow and reimbursement timelines
  • Lower the risk of billing errors to increase clean claim rates
  • Recognize claim denials and rejections immediately so you can drill down into root causes and promote proactive denial prevention
  • Reduce manual data entry in revenue cycle management
  • Send claims electronically or print paper claims, if needed

Tip: Ask the vendor to walk you through how its system handles a claim from initial charge capture to final payment posting and denial resolution. This helps you evaluate billing workflows and how well the technology may or may not support efficiency, transparency, and revenue recovery.

The best medical billing software expedites claim submission to increase cash flow and reimbursement timelines.

Real-time eligibility verification

When it comes to eligibility verification, not all medical billing software vendors can support complex coverage needs and scalability. 

The best medical billing software features:

  • Real-time eligibility (RTE) checks
  • Ways to easily access eligibility information and track authorized visits (this is especially important as physicians and their staff spend 13 hours each week completing prior authorizations)
  • Integration with payers, government and commercial insurance companies, and clearinghouses
  • Provide information about patient payment responsibility
  • Reduce claim denials and rejections stemming from lack of coverage and/or benefits
  • Submit batch insurance eligibility to increase efficiency

Tip: Test real-time accuracy across multiple payers. Check whether the system automates batch verification and flags potential issues (e.g., inactive policies or plan mismatches) before the patient arrives.

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HIPAA compliance and data security

Some medical billing software vendors simply don’t provide the level of data protection today’s vulnerable medical practices need. 

The best medical billing software features:

  • Ensure built-in access controls, updated encryption protocols, and audit trails
  • Protect patient data and ensure legal compliance with healthcare regulations
  • Provide on-demand, HIPAA-compliant, secure data storage

Tip: Verify that the vendor provides a signed Business Associate Agreement. Also, ask the vendor how it handles breach notification, incident response, and user role management to evaluate real-world readiness — not just checkboxes.

Look for billing software that protects patient data and ensures legal compliance with healthcare regulations.

Integrated EHR/EMR compatibility 

Many medical billing systems do not offer true real-time, bi-directional integration with electronic health records or EMRs. This means clinical and billing data may not sync automatically, and you may need to enter data manually or perform batch uploads — causing errors and inefficiencies. 

The best medical billing software features:

  • Enable seamless sharing of patient records between clinical and billing systems
  • Promote automated workflows
  • Enhance interoperability with patient scheduling and communication tools and other systems

Tip: Ask whether the medical billing software allows clinical and billing data (e.g., demographics, insurance, charges, CPT/ICD-10-CM codes, documentation) to flow seamlessly and in real-time between the EHR and billing system in healthcare practices.

Choose the right EHR with insights from independent providers and real-world data.

Customizable reporting

Subpar medical billing solutions may result in insufficient granularity or no access to real-time data. 

The best medical billing software features:

  • Drill down into data for clearer revenue cycle insights
  • Monitor claims status, denials, or cash flow, enabling informed decisions
  • Provide access to patient records, appointment scheduling, task and payment tracking, document storage, reports, and more
  • Track KPIs through custom financial reports 
  • Visualize financial performance with ease

Tip: Ask the vendor how a front-office staff member, biller, and administrator would generate a report tailored to their needs. Also, test the ability to create ad hoc reports without needing IT support or advanced technical skills.

Patient payments access

Limited payment options, inflexible user interfaces, and minimal financial assistance integration are just a few of the drawbacks associated with some medical billing software solutions. 

Alternatively, the best medical billing software features:

  • Give patients easy access to bills, insurance information, and payment options
  • Offer customizable text/email reminders and automated follow-ups
  • Promote patient engagement and increase patient satisfaction
  • Provide real-time balance information
  • Support a variety of modern payment methods for payment processing through a secure payment terminal
  • Support charity care, sliding scales, or financial assistance application workflows

Tip: Test the patient experience from the user side — ease of login, mobile responsiveness, and clarity of billing statements are key indicators of usability and effectiveness.

Test the patient experience from the user side — ease of login, mobile responsiveness, and clarity of billing statements are key indicators of usability and effectiveness.

Scalability and cloud-based access

Some medical billing software solutions tend to fall short in terms of being able to support medical practices as they grow. 

The best medical billing software features:

  • Leverage HIPAA-compliant, cloud-based data storage
  • Provide fast, real-time reporting and analytics critical for larger practices managing complex billing
  • Support growth without major reinvestment in infrastructure

Tip: Ask whether the software can support increased patient volumes and expanded service lines without degrading performance. Ask for references from practices that have scaled their businesses using the same system.

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Choose features that fit your specific needs

While many medical billing platforms offer similar tools, the right medical billing software should support your unique workflows and specific needs, practice size, and compliance goals. Choosing a software solution is one of the most important decisions you’ll make, and your medical billing team should be involved in every step of the process. 

Finding the right fit to match practice needs is critical. Tebra’s practice management software adapts to the way you work and includes the medical billing software features you need — regardless of whether you’re a solo provider, a growing practice, or a billing company managing multiple clients.

Book a demo, take a tour, or get customized pricing to learn more about how the right medical billing software can elevate your billing and promote financial sustainability. 

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Lisa Eramo, freelance healthcare writer

Lisa A. Eramo, BA, MA is a freelance writer specializing in health information management, medical coding, and regulatory topics. She began her healthcare career as a referral specialist for a well-known cancer center. Lisa went on to work for several years at a healthcare publishing company. She regularly contributes to healthcare publications, websites, and blogs, including the AHIMA Journal. Her focus areas are medical coding, and ICD-10 in particular, clinical documentation improvement, and healthcare quality/efficiency.

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